Submissions from 2021
Mammalian nuclear TRUB1, mitochondrial TRUB2, and cytoplasmic PUS10 produce conserved pseudouridine 55 in different sets of tRNA., Shaoni Mukhopadhyay, Manisha Deogharia, and Ramesh Gupta
Submissions from 2020
The presence of the ACA box in archaeal H/ACA guide RNAs promotes atypical pseudouridylation., Mrinmoyee Majumder, Shaoni Mukhopadhyay, Parinati Kharel, and Ramesh Gupta
Submissions from 2019
The human ortholog of archaeal Pus10 produces pseudouridine 54 in select tRNAs where its recognition sequence contains a modified residue., Manisha Deogharia, Shaoni Mukhopadhyay, Archi Joardar, and Ramesh Gupta
Analysis of Human Mitochondrial DNA Content by Southern Blotting and Nonradioactive Probe Hybridization., Joel H Wheeler, Carolyn K J Young, and Matthew J Young
Comparison of HepaRG cells following growth in proliferative and differentiated culture conditions reveals distinct bioenergetic profiles., Carolyn K J Young and Matthew J Young
Submissions from 2018
Evolution of Eukaryal and Archaeal Pseudouridine Synthase Pus10., Elisabeth Fitzek, Archi Joardar, Ramesh Gupta, and Matt Geisler
Submissions from 2017
Reciprocal amplification of caspase-3 activity by nuclear export of a putative human RNA-modifying protein, PUS10 during TRAIL-induced apoptosis., Sujata Jana, Andrew C Hsieh, and Ramesh Gupta
Off-Target Effects of Drugs that Disrupt Human Mitochondrial DNA Maintenance., Matthew J Young
Submissions from 2016
Observation on the ultrastructure morphology of HeLa cells treated with ethanol: Statistical analysis., Fakhri Al-Bagdadi, Matthew J Young, James P Geaghan, Shaomian Yao, Humberto M Barona, Eduardo Martinez-Ceballos, and Masami Yoshimura
Endonuclease activities of MutLα and its homologs in DNA mismatch repair., Lyudmila Y Kadyrova and Farid A Kadyrov
Structure-function relationships of archaeal Cbf5 during in vivo RNA-guided pseudouridylation., Mrinmoyee Majumder, Michael S Bosmeny, and Ramesh Gupta
DNA mismatch repair interacts with CAF-1- and ASF1A-H3-H4-dependent histone (H3-H4)2 tetramer deposition., Elena Rodriges Blanko, Lyudmila Y Kadyrova, and Farid A Kadyrov
Regulation of Antisense Transcription by NuA4 Histone Acetyltransferase and Other Chromatin Regulatory Factors., Bhawana Uprety, Amala Kaja, Jannatul Ferdoush, Rwik Sen, and Sukesh R. Bhaumik
Human mitochondrial DNA replication machinery and disease., Matthew J Young and William C Copeland
Submissions from 2015
Evidence that the DNA mismatch repair system removes 1-nucleotide Okazaki fragment flaps., Lyudmila Y Kadyrova, Basanta K Dahal, and Farid A Kadyrov
Eaf1p Is Required for Recruitment of NuA4 in Targeting TFIID to the Promoters of the Ribosomal Protein Genes for Transcriptional Initiation In Vivo., Bhawana Uprety, Rwik Sen, and Sukesh R. Bhaumik
Alternative splicing of MEF2C pre-mRNA controls its activity in normal myogenesis and promotes tumorigenicity in rhabdomyosarcoma cells., Meiling Zhang, Bo Zhu, and Judith Davie
TBX2 represses PTEN in rhabdomyosarcoma and skeletal muscle., B Zhu, M Zhang, E M Williams, C Keller, A Mansoor, and J K Davie
Submissions from 2014
RNAi factors are present and active in human cell nuclei, Keith T. Gagnon, Liande Li, Yongjun Chu, Bethany Janowski, and David R. Corey
Rrd1p, an RNA polymerase II-specific prolyl isomerase and activator of phosphoprotein phosphatase, promotes transcription independently of rapamycin response., Rwik Sen, Shivani Malik, Sarah Frankland-Searby, Bhawana Uprety, Shweta Lahudkar, and Sukesh R Bhaumik
Submissions from 2013
Loss of MEF2D expression inhibits differentiation and contributes to oncogenesis in rhabdomyosarcoma cells., Meiling Zhang, Jamie Truscott, and Judith Davie